Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Tlr3Q99MB1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Thap2-203ENSMUST00000218989 527 ntBASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tlr3Q99MB1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Gm16198-201ENSMUST00000118766 670 ntBASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Gm15920-201ENSMUST00000118998 402 ntBASIC15.89■□□□□ 0.13
Tlr3Q99MB1 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Gm11025-201ENSMUST00000140773 466 ntBASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Gm10154-201ENSMUST00000084445 354 ntBASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tlr3Q99MB1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tlr3Q99MB1 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tlr3Q99MB1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms