Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Gm8749-201ENSMUST00000117737 331 ntBASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Gm6443-201ENSMUST00000203599 874 ntBASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb1Q91Y08 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Gm13464-201ENSMUST00000119418 935 ntBASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Gm5867-201ENSMUST00000063197 592 ntBASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb1Q91Y08 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Gm9727-201ENSMUST00000161387 555 ntBASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Gm5364-201ENSMUST00000216789 889 ntBASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb1Q91Y08 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms