Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Gm37153-201ENSMUST00000193637 231 ntBASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb4Q91XZ6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb4Q91XZ6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb4Q91XZ6 Gm7222-201ENSMUST00000117512 906 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms