Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Gm9726-201ENSMUST00000180321 678 ntBASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb6Q91XZ4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb6Q91XZ4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb6Q91XZ4 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.21■□□□□ 0.02
Pcdhb6Q91XZ4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb6Q91XZ4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb6Q91XZ4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Mir8117-201ENSMUST00000184773 107 ntBASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb6Q91XZ4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Gm2451-201ENSMUST00000199447 999 ntBASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Gm10290-201ENSMUST00000200451 999 ntBASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Gm18206-201ENSMUST00000207027 926 ntBASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms