Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
StrcQ8VIM6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.33■□□□□ 0.36
StrcQ8VIM6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.32■□□□□ 0.36
StrcQ8VIM6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
StrcQ8VIM6 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
StrcQ8VIM6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.31■□□□□ 0.36
StrcQ8VIM6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
StrcQ8VIM6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
StrcQ8VIM6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
StrcQ8VIM6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.31■□□□□ 0.36
StrcQ8VIM6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
StrcQ8VIM6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
StrcQ8VIM6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
StrcQ8VIM6 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
StrcQ8VIM6 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.31■□□□□ 0.36
StrcQ8VIM6 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.31■□□□□ 0.36
StrcQ8VIM6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.31■□□□□ 0.36
StrcQ8VIM6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
StrcQ8VIM6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
StrcQ8VIM6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
StrcQ8VIM6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
StrcQ8VIM6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.3■□□□□ 0.36
StrcQ8VIM6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
StrcQ8VIM6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.3■□□□□ 0.36
StrcQ8VIM6 Gm27847-201ENSMUST00000183711 107 ntBASIC17.3■□□□□ 0.36
StrcQ8VIM6 Gm27375-201ENSMUST00000183799 107 ntBASIC17.3■□□□□ 0.36
StrcQ8VIM6 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
StrcQ8VIM6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.3■□□□□ 0.36
StrcQ8VIM6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
StrcQ8VIM6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
StrcQ8VIM6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.3■□□□□ 0.36
StrcQ8VIM6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
StrcQ8VIM6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.3■□□□□ 0.36
StrcQ8VIM6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
StrcQ8VIM6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
StrcQ8VIM6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
StrcQ8VIM6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
StrcQ8VIM6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Gm13350-201ENSMUST00000120519 479 ntBASIC17.29■□□□□ 0.36
StrcQ8VIM6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.29■□□□□ 0.36
StrcQ8VIM6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.29■□□□□ 0.36
StrcQ8VIM6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
StrcQ8VIM6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Gm12485-201ENSMUST00000119641 291 ntBASIC17.28■□□□□ 0.36
StrcQ8VIM6 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Gm37714-201ENSMUST00000194742 342 ntBASIC17.28■□□□□ 0.36
StrcQ8VIM6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.28■□□□□ 0.36
StrcQ8VIM6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Gm44608-201ENSMUST00000206827 855 ntBASIC17.28■□□□□ 0.36
StrcQ8VIM6 Gm40466-201ENSMUST00000212174 422 ntBASIC17.28■□□□□ 0.36
StrcQ8VIM6 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.28■□□□□ 0.36
StrcQ8VIM6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
StrcQ8VIM6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
StrcQ8VIM6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
StrcQ8VIM6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
StrcQ8VIM6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
StrcQ8VIM6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms