Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Gm12644-201ENSMUST00000119935 606 ntBASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SfpqQ8VIJ6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Gm7284-201ENSMUST00000131667 944 ntBASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Gm27357-201ENSMUST00000183754 135 ntBASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Gm6296-201ENSMUST00000222599 943 ntBASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SfpqQ8VIJ6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Gm27646-201ENSMUST00000183989 110 ntBASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SfpqQ8VIJ6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SfpqQ8VIJ6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SfpqQ8VIJ6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SfpqQ8VIJ6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SfpqQ8VIJ6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SfpqQ8VIJ6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SfpqQ8VIJ6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SfpqQ8VIJ6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SfpqQ8VIJ6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.64■□□□□ 0.09
SfpqQ8VIJ6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SfpqQ8VIJ6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.64■□□□□ 0.09
SfpqQ8VIJ6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SfpqQ8VIJ6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SfpqQ8VIJ6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SfpqQ8VIJ6 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms