Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd109Q8R422 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd109Q8R422 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cd109Q8R422 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd109Q8R422 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd109Q8R422 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cd109Q8R422 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd109Q8R422 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd109Q8R422 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC20.84■□□□□ 0.93
Cd109Q8R422 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC20.84■□□□□ 0.93
Cd109Q8R422 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd109Q8R422 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd109Q8R422 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd109Q8R422 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd109Q8R422 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd109Q8R422 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC20.84■□□□□ 0.93
Cd109Q8R422 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Cd109Q8R422 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Cd109Q8R422 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd109Q8R422 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd109Q8R422 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC20.84■□□□□ 0.93
Cd109Q8R422 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cd109Q8R422 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC20.84■□□□□ 0.93
Cd109Q8R422 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cd109Q8R422 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cd109Q8R422 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd109Q8R422 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Cd109Q8R422 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cd109Q8R422 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd109Q8R422 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cd109Q8R422 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Cd109Q8R422 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd109Q8R422 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC20.83■□□□□ 0.93
Cd109Q8R422 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC20.83■□□□□ 0.93
Cd109Q8R422 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC20.83■□□□□ 0.93
Cd109Q8R422 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC20.83■□□□□ 0.93
Cd109Q8R422 AC121804.3-201ENSMUST00000223420 295 ntBASIC20.83■□□□□ 0.93
Cd109Q8R422 AC154239.3-201ENSMUST00000226933 674 ntBASIC20.83■□□□□ 0.93
Cd109Q8R422 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cd109Q8R422 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cd109Q8R422 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Cd109Q8R422 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cd109Q8R422 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cd109Q8R422 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC20.83■□□□□ 0.92
Cd109Q8R422 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cd109Q8R422 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Cd109Q8R422 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cd109Q8R422 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cd109Q8R422 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Cd109Q8R422 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cd109Q8R422 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Cd109Q8R422 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Cd109Q8R422 Gm8515-201ENSMUST00000194852 576 ntBASIC20.82■□□□□ 0.92
Cd109Q8R422 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC20.82■□□□□ 0.92
Cd109Q8R422 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC20.82■□□□□ 0.92
Cd109Q8R422 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cd109Q8R422 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Gm45667-201ENSMUST00000210380 1316 ntBASIC20.82■□□□□ 0.92
Cd109Q8R422 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cd109Q8R422 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd109Q8R422 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
Cd109Q8R422 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Cd109Q8R422 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Gm23984-201ENSMUST00000157139 203 ntBASIC20.81■□□□□ 0.92
Cd109Q8R422 Gm10766-202ENSMUST00000194123 606 ntBASIC20.81■□□□□ 0.92
Cd109Q8R422 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cd109Q8R422 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd109Q8R422 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cd109Q8R422 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cd109Q8R422 Gm6745-201ENSMUST00000199216 526 ntBASIC20.8■□□□□ 0.92
Cd109Q8R422 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cd109Q8R422 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms