Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Gm6345-202ENSMUST00000180900 204 ntBASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc58Q8R3Q6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc58Q8R3Q6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc58Q8R3Q6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms