Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.61□□□□□ -0.07
Treml1Q8K558 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Treml1Q8K558 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Treml1Q8K558 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.61□□□□□ -0.07
Treml1Q8K558 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.61□□□□□ -0.07
Treml1Q8K558 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.61□□□□□ -0.07
Treml1Q8K558 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.61□□□□□ -0.07
Treml1Q8K558 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.61□□□□□ -0.07
Treml1Q8K558 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.61□□□□□ -0.07
Treml1Q8K558 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Treml1Q8K558 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Treml1Q8K558 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Treml1Q8K558 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Treml1Q8K558 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Treml1Q8K558 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Treml1Q8K558 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Treml1Q8K558 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Treml1Q8K558 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.6□□□□□ -0.07
Treml1Q8K558 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.6□□□□□ -0.07
Treml1Q8K558 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.6□□□□□ -0.07
Treml1Q8K558 Gm15427-201ENSMUST00000117288 531 ntBASIC14.6□□□□□ -0.07
Treml1Q8K558 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.6□□□□□ -0.07
Treml1Q8K558 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.6□□□□□ -0.07
Treml1Q8K558 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.6□□□□□ -0.07
Treml1Q8K558 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.6□□□□□ -0.07
Treml1Q8K558 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.6□□□□□ -0.07
Treml1Q8K558 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.6□□□□□ -0.07
Treml1Q8K558 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.6□□□□□ -0.07
Treml1Q8K558 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Treml1Q8K558 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Treml1Q8K558 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Treml1Q8K558 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.59□□□□□ -0.07
Treml1Q8K558 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Treml1Q8K558 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.59□□□□□ -0.07
Treml1Q8K558 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.59□□□□□ -0.07
Treml1Q8K558 Rpph1-201ENSMUST00000175096 319 ntBASIC14.59□□□□□ -0.07
Treml1Q8K558 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.59□□□□□ -0.07
Treml1Q8K558 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.59□□□□□ -0.07
Treml1Q8K558 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Treml1Q8K558 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Treml1Q8K558 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Treml1Q8K558 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Treml1Q8K558 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Treml1Q8K558 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Treml1Q8K558 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Treml1Q8K558 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms