Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf4Q8K4J2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf4Q8K4J2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf4Q8K4J2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf4Q8K4J2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf4Q8K4J2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf4Q8K4J2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Ebf4Q8K4J2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf4Q8K4J2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf4Q8K4J2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf4Q8K4J2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf4Q8K4J2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf4Q8K4J2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf4Q8K4J2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf4Q8K4J2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf4Q8K4J2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf4Q8K4J2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Gm21559-201ENSMUST00000220638 855 ntBASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Gm8587-201ENSMUST00000076538 843 ntBASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms