Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cchcr1Q8K2I2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cchcr1Q8K2I2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cchcr1Q8K2I2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Cchcr1Q8K2I2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cchcr1Q8K2I2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cchcr1Q8K2I2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cchcr1Q8K2I2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cchcr1Q8K2I2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cchcr1Q8K2I2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.52■□□□□ 0.39
Cchcr1Q8K2I2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Gm13036-201ENSMUST00000117799 748 ntBASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cchcr1Q8K2I2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cchcr1Q8K2I2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms