Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm14767-201ENSMUST00000121559 586 ntBASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Gm9719-201ENSMUST00000162765 543 ntBASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Gm7063-201ENSMUST00000186840 981 ntBASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Gm6888-201ENSMUST00000221983 706 ntBASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.12■□□□□ 0.65
Rab11fip3Q8CHD8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab11fip3Q8CHD8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Gm27533-201ENSMUST00000183800 152 ntBASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Mir8102-201ENSMUST00000184148 139 ntBASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab11fip3Q8CHD8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm27680-201ENSMUST00000184192 160 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm29310-201ENSMUST00000185468 696 ntBASIC19.09■□□□□ 0.65
Rab11fip3Q8CHD8 Gm21825-201ENSMUST00000185728 696 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms