Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc5Q8CG46 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Smc5Q8CG46 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc5Q8CG46 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc5Q8CG46 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc5Q8CG46 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc5Q8CG46 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc5Q8CG46 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc5Q8CG46 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc5Q8CG46 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Smc5Q8CG46 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc5Q8CG46 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.33■□□□□ 0.52
Smc5Q8CG46 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc5Q8CG46 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.32■□□□□ 0.52
Smc5Q8CG46 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Gm27459-201ENSMUST00000184860 107 ntBASIC18.32■□□□□ 0.52
Smc5Q8CG46 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.32■□□□□ 0.52
Smc5Q8CG46 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc5Q8CG46 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.31■□□□□ 0.52
Smc5Q8CG46 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Gm7230-201ENSMUST00000173026 815 ntBASIC18.31■□□□□ 0.52
Smc5Q8CG46 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.31■□□□□ 0.52
Smc5Q8CG46 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.31■□□□□ 0.52
Smc5Q8CG46 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc5Q8CG46 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms