Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sh3rf3Q8C120 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sh3rf3Q8C120 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
Sh3rf3Q8C120 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf3Q8C120 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Gm12008-201ENSMUST00000117791 755 ntBASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Gm17968-201ENSMUST00000194902 784 ntBASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Sh3rf3Q8C120 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Gm44771-201ENSMUST00000206975 626 ntBASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 AW822252-206ENSMUST00000208904 237 ntBASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf3Q8C120 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms