Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Depdc1bQ8BH88 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Depdc1bQ8BH88 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Gm27300-201ENSMUST00000184085 97 ntBASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Gm27335-201ENSMUST00000184758 97 ntBASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Depdc1bQ8BH88 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Depdc1bQ8BH88 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Depdc1bQ8BH88 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Depdc1bQ8BH88 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Depdc1bQ8BH88 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Depdc1bQ8BH88 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Depdc1bQ8BH88 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms