Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trnp1Q80ZI1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trnp1Q80ZI1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
Trnp1Q80ZI1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trnp1Q80ZI1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trnp1Q80ZI1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Trnp1Q80ZI1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Gm5356-201ENSMUST00000093326 615 ntBASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trnp1Q80ZI1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trnp1Q80ZI1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Gm12957-201ENSMUST00000117835 377 ntBASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Gm12390-201ENSMUST00000117897 397 ntBASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Gm9726-201ENSMUST00000180321 678 ntBASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Gm45331-201ENSMUST00000209868 554 ntBASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trnp1Q80ZI1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms