Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.55□□□□□ -0.4
Upk3bQ80YF6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Upk3bQ80YF6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk3bQ80YF6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms