Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Gm9824-201ENSMUST00000178707 561 ntBASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Gm15483-201ENSMUST00000120338 456 ntBASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Gm22175-201ENSMUST00000175007 78 ntBASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Auts2-212ENSMUST00000178555 309 ntBASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Gm27920-201ENSMUST00000183953 96 ntBASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh19Q80TF3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh19Q80TF3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh19Q80TF3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh19Q80TF3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh19Q80TF3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh19Q80TF3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh19Q80TF3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh19Q80TF3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh19Q80TF3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.08
Pcdh19Q80TF3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.52□□□□□ -0.08
Pcdh19Q80TF3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 AA543401-201ENSMUST00000164248 1269 ntBASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdh19Q80TF3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms