Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx4Q7TNK1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Gm12497-201ENSMUST00000138778 237 ntBASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx4Q7TNK1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Gm15358-201ENSMUST00000119249 520 ntBASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx4Q7TNK1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Gm11950-201ENSMUST00000121615 838 ntBASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx4Q7TNK1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms