Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.45□□□□□ -0.1
Scn4bQ7M729 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn4bQ7M729 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.44□□□□□ -0.1
Scn4bQ7M729 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.44□□□□□ -0.1
Scn4bQ7M729 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Psmb5-202ENSMUST00000227257 622 ntBASIC14.44□□□□□ -0.1
Scn4bQ7M729 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn4bQ7M729 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scn4bQ7M729 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn4bQ7M729 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Gm14140-201ENSMUST00000119999 995 ntBASIC14.42□□□□□ -0.1
Scn4bQ7M729 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.42□□□□□ -0.1
Scn4bQ7M729 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Gm6443-201ENSMUST00000203599 874 ntBASIC14.42□□□□□ -0.1
Scn4bQ7M729 Gm18206-201ENSMUST00000207027 926 ntBASIC14.42□□□□□ -0.1
Scn4bQ7M729 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.42□□□□□ -0.1
Scn4bQ7M729 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn4bQ7M729 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.41□□□□□ -0.1
Scn4bQ7M729 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn4bQ7M729 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms