Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Gm22697-201ENSMUST00000175194 63 ntBASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Gm37055-201ENSMUST00000191866 133 ntBASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Gm43767-201ENSMUST00000198933 381 ntBASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RfflQ6ZQM0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Gm13312-201ENSMUST00000119631 718 ntBASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Gm8344-201ENSMUST00000119813 856 ntBASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RfflQ6ZQM0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Gm18622-201ENSMUST00000219361 595 ntBASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RfflQ6ZQM0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RfflQ6ZQM0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RfflQ6ZQM0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RfflQ6ZQM0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RfflQ6ZQM0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.33□□□□□ -0.12
RfflQ6ZQM0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RfflQ6ZQM0 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.33□□□□□ -0.12
RfflQ6ZQM0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RfflQ6ZQM0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RfflQ6ZQM0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms