Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac4Q6NZM9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac4Q6NZM9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac4Q6NZM9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac4Q6NZM9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac4Q6NZM9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac4Q6NZM9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac4Q6NZM9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac4Q6NZM9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac4Q6NZM9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac4Q6NZM9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac4Q6NZM9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Gm2451-201ENSMUST00000199447 999 ntBASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Gm10290-201ENSMUST00000200451 999 ntBASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac4Q6NZM9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Gm9385-201ENSMUST00000117563 472 ntBASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac4Q6NZM9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Hdac4Q6NZM9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms