Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.78■□□□□ 0.12
Six2Q62232 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.78■□□□□ 0.12
Six2Q62232 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.77■□□□□ 0.12
Six2Q62232 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Six2Q62232 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.77■□□□□ 0.12
Six2Q62232 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Six2Q62232 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Six2Q62232 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.77■□□□□ 0.12
Six2Q62232 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Six2Q62232 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.77■□□□□ 0.12
Six2Q62232 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.77■□□□□ 0.12
Six2Q62232 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.77■□□□□ 0.12
Six2Q62232 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.77■□□□□ 0.12
Six2Q62232 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.77■□□□□ 0.12
Six2Q62232 Gm5364-201ENSMUST00000216789 889 ntBASIC15.77■□□□□ 0.12
Six2Q62232 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Six2Q62232 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Six2Q62232 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Six2Q62232 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six2Q62232 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Six2Q62232 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.77■□□□□ 0.11
Six2Q62232 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six2Q62232 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six2Q62232 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six2Q62232 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Six2Q62232 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six2Q62232 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Six2Q62232 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Six2Q62232 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Six2Q62232 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Six2Q62232 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.76■□□□□ 0.11
Six2Q62232 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.76■□□□□ 0.11
Six2Q62232 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.76■□□□□ 0.11
Six2Q62232 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.76■□□□□ 0.11
Six2Q62232 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.76■□□□□ 0.11
Six2Q62232 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.76■□□□□ 0.11
Six2Q62232 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Six2Q62232 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.76■□□□□ 0.11
Six2Q62232 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.76■□□□□ 0.11
Six2Q62232 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.76■□□□□ 0.11
Six2Q62232 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.76■□□□□ 0.11
Six2Q62232 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Six2Q62232 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six2Q62232 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.76■□□□□ 0.11
Six2Q62232 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Six2Q62232 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six2Q62232 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six2Q62232 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six2Q62232 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six2Q62232 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six2Q62232 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six2Q62232 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.75■□□□□ 0.11
Six2Q62232 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six2Q62232 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six2Q62232 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Six2Q62232 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six2Q62232 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six2Q62232 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Six2Q62232 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Six2Q62232 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six2Q62232 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms