Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccne1Q61457 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccne1Q61457 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccne1Q61457 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccne1Q61457 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ccne1Q61457 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccne1Q61457 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccne1Q61457 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccne1Q61457 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccne1Q61457 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccne1Q61457 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccne1Q61457 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Gm14928-201ENSMUST00000120198 477 ntBASIC19.19■□□□□ 0.66
Ccne1Q61457 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Gm9794-201ENSMUST00000202370 423 ntBASIC19.19■□□□□ 0.66
Ccne1Q61457 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.19■□□□□ 0.66
Ccne1Q61457 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19.19■□□□□ 0.66
Ccne1Q61457 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Gm21009-201ENSMUST00000197169 1669 ntBASIC19.19■□□□□ 0.66
Ccne1Q61457 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.19■□□□□ 0.66
Ccne1Q61457 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ccne1Q61457 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccne1Q61457 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccne1Q61457 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Ccne1Q61457 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccne1Q61457 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccne1Q61457 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccne1Q61457 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccne1Q61457 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ccne1Q61457 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccne1Q61457 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.18■□□□□ 0.66
Ccne1Q61457 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ccne1Q61457 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccne1Q61457 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC19.18■□□□□ 0.66
Ccne1Q61457 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC19.18■□□□□ 0.66
Ccne1Q61457 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccne1Q61457 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccne1Q61457 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccne1Q61457 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.18■□□□□ 0.66
Ccne1Q61457 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccne1Q61457 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccne1Q61457 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccne1Q61457 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccne1Q61457 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccne1Q61457 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccne1Q61457 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccne1Q61457 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccne1Q61457 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccne1Q61457 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC19.17■□□□□ 0.66
Ccne1Q61457 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC19.17■□□□□ 0.66
Ccne1Q61457 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccne1Q61457 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccne1Q61457 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccne1Q61457 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccne1Q61457 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccne1Q61457 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccne1Q61457 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccne1Q61457 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccne1Q61457 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccne1Q61457 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccne1Q61457 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccne1Q61457 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccne1Q61457 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccne1Q61457 Gm12490-201ENSMUST00000120255 560 ntBASIC19.16■□□□□ 0.66
Ccne1Q61457 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC19.16■□□□□ 0.66
Ccne1Q61457 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccne1Q61457 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccne1Q61457 Gm3436-201ENSMUST00000179930 840 ntBASIC19.16■□□□□ 0.66
Ccne1Q61457 Gm9726-201ENSMUST00000180321 678 ntBASIC19.16■□□□□ 0.66
Ccne1Q61457 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccne1Q61457 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccne1Q61457 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.16■□□□□ 0.66
Ccne1Q61457 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Ccne1Q61457 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccne1Q61457 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Ccne1Q61457 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccne1Q61457 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccne1Q61457 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccne1Q61457 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccne1Q61457 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccne1Q61457 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccne1Q61457 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccne1Q61457 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccne1Q61457 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccne1Q61457 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccne1Q61457 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccne1Q61457 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccne1Q61457 Gm22189-201ENSMUST00000103822 86 ntBASIC19.15■□□□□ 0.66
Ccne1Q61457 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms