Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
ClpbQ60649 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ClpbQ60649 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.24□□□□□ -0.13
ClpbQ60649 Celf4-206ENSMUST00000224553 1729 ntBASIC14.24□□□□□ -0.13
ClpbQ60649 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.24□□□□□ -0.13
ClpbQ60649 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.23□□□□□ -0.13
ClpbQ60649 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.23□□□□□ -0.13
ClpbQ60649 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.23□□□□□ -0.13
ClpbQ60649 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.23□□□□□ -0.13
ClpbQ60649 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
ClpbQ60649 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
ClpbQ60649 Gm18246-201ENSMUST00000221023 728 ntBASIC14.23□□□□□ -0.13
ClpbQ60649 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.23□□□□□ -0.13
ClpbQ60649 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.23□□□□□ -0.13
ClpbQ60649 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.23□□□□□ -0.13
ClpbQ60649 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ClpbQ60649 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClpbQ60649 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.22□□□□□ -0.13
ClpbQ60649 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ClpbQ60649 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ClpbQ60649 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.22□□□□□ -0.13
ClpbQ60649 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ClpbQ60649 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.22□□□□□ -0.13
ClpbQ60649 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.22□□□□□ -0.13
ClpbQ60649 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.22□□□□□ -0.13
ClpbQ60649 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.22□□□□□ -0.13
ClpbQ60649 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.22□□□□□ -0.13
ClpbQ60649 Gm10499-201ENSMUST00000174094 934 ntBASIC14.22□□□□□ -0.13
ClpbQ60649 Gm24513-201ENSMUST00000174964 138 ntBASIC14.22□□□□□ -0.13
ClpbQ60649 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Gm27397-201ENSMUST00000184997 107 ntBASIC14.22□□□□□ -0.13
ClpbQ60649 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.22□□□□□ -0.13
ClpbQ60649 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.22□□□□□ -0.13
ClpbQ60649 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.22□□□□□ -0.13
ClpbQ60649 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
ClpbQ60649 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.22□□□□□ -0.13
ClpbQ60649 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.22□□□□□ -0.13
ClpbQ60649 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ClpbQ60649 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ClpbQ60649 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ClpbQ60649 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ClpbQ60649 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.22□□□□□ -0.13
ClpbQ60649 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClpbQ60649 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ClpbQ60649 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ClpbQ60649 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ClpbQ60649 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClpbQ60649 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClpbQ60649 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.21□□□□□ -0.13
ClpbQ60649 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ClpbQ60649 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.21□□□□□ -0.13
ClpbQ60649 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClpbQ60649 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClpbQ60649 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms