Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1h4Q60641 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1h4Q60641 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.13□□□□□ -0.15
Nr1h4Q60641 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.13□□□□□ -0.15
Nr1h4Q60641 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1h4Q60641 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1h4Q60641 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nr1h4Q60641 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1h4Q60641 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1h4Q60641 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1h4Q60641 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1h4Q60641 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Nr1h4Q60641 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.12□□□□□ -0.15
Nr1h4Q60641 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nr1h4Q60641 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.11□□□□□ -0.15
Nr1h4Q60641 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Gm10499-201ENSMUST00000174094 934 ntBASIC14.11□□□□□ -0.15
Nr1h4Q60641 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.11□□□□□ -0.15
Nr1h4Q60641 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.11□□□□□ -0.15
Nr1h4Q60641 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nr1h4Q60641 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nr1h4Q60641 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.1□□□□□ -0.15
Nr1h4Q60641 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.1□□□□□ -0.15
Nr1h4Q60641 Gm12895-201ENSMUST00000122214 226 ntBASIC14.1□□□□□ -0.15
Nr1h4Q60641 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.1□□□□□ -0.15
Nr1h4Q60641 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms