Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Gm33142-201ENSMUST00000193913 867 ntBASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pabpn1lQ5XFR0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pabpn1lQ5XFR0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Gm7213-201ENSMUST00000215977 950 ntBASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.86□□□□□ -0.03
Pabpn1lQ5XFR0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pabpn1lQ5XFR0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pabpn1lQ5XFR0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pabpn1lQ5XFR0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pabpn1lQ5XFR0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pabpn1lQ5XFR0 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.85□□□□□ -0.03
Pabpn1lQ5XFR0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pabpn1lQ5XFR0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pabpn1lQ5XFR0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pabpn1lQ5XFR0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.85□□□□□ -0.03
Pabpn1lQ5XFR0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.85□□□□□ -0.03
Pabpn1lQ5XFR0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pabpn1lQ5XFR0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms