Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Shroom1Q5SX79 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.77■□□□□ 0.12
Shroom1Q5SX79 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom1Q5SX79 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom1Q5SX79 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.75■□□□□ 0.11
Shroom1Q5SX79 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.74■□□□□ 0.11
Shroom1Q5SX79 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms