Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Gm11918-201ENSMUST00000121660 179 ntBASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc85aQ5SP85 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm27631-201ENSMUST00000184163 466 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm29310-201ENSMUST00000185468 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21825-201ENSMUST00000185728 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm29109-201ENSMUST00000185895 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21896-201ENSMUST00000186520 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21873-201ENSMUST00000186728 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21794-201ENSMUST00000187056 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21880-201ENSMUST00000187275 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21826-201ENSMUST00000187451 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21198-201ENSMUST00000188393 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21749-201ENSMUST00000189343 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21901-201ENSMUST00000189568 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm29424-201ENSMUST00000189716 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm28599-201ENSMUST00000189838 694 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21867-201ENSMUST00000189917 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm29269-201ENSMUST00000190087 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21722-201ENSMUST00000190153 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm28423-201ENSMUST00000190701 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21899-201ENSMUST00000190745 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21910-201ENSMUST00000191163 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21849-201ENSMUST00000191571 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm28678-201ENSMUST00000191593 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm20910-201ENSMUST00000193268 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm21871-201ENSMUST00000194621 696 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc85aQ5SP85 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc85aQ5SP85 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.28■□□□□ 0.2
Ccdc85aQ5SP85 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc85aQ5SP85 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc85aQ5SP85 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc85aQ5SP85 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc85aQ5SP85 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms