Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav2Q5R1I9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trav2Q5R1I9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav2Q5R1I9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Gm6973-201ENSMUST00000117080 721 ntBASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Gm43474-201ENSMUST00000196415 774 ntBASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Sybu-209ENSMUST00000228639 4113 ntBASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav2Q5R1I9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms