Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trdv4Q5R1A3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv4Q5R1A3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv4Q5R1A3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms