Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Gm16026-204ENSMUST00000162652 683 ntBASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.34
Cdkl5Q3UTQ8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cdkl5Q3UTQ8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl5Q3UTQ8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Gm18206-201ENSMUST00000207027 926 ntBASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl5Q3UTQ8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms