Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Mmp25Q3U435 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Chchd1-203ENSMUST00000224633 557 ntBASIC13.94□□□□□ -0.18
Mmp25Q3U435 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp25Q3U435 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Mmp25Q3U435 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.93□□□□□ -0.18
Mmp25Q3U435 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.93□□□□□ -0.18
Mmp25Q3U435 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.93□□□□□ -0.18
Mmp25Q3U435 Gm15483-201ENSMUST00000120338 456 ntBASIC13.93□□□□□ -0.18
Mmp25Q3U435 Gm13365-201ENSMUST00000121188 973 ntBASIC13.93□□□□□ -0.18
Mmp25Q3U435 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Mmp25Q3U435 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Mmp25Q3U435 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.93□□□□□ -0.18
Mmp25Q3U435 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Gm5867-201ENSMUST00000063197 592 ntBASIC13.93□□□□□ -0.18
Mmp25Q3U435 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp25Q3U435 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.93□□□□□ -0.18
Mmp25Q3U435 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp25Q3U435 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp25Q3U435 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp25Q3U435 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp25Q3U435 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Mmp25Q3U435 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp25Q3U435 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp25Q3U435 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp25Q3U435 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp25Q3U435 Gm8749-201ENSMUST00000117737 331 ntBASIC13.92□□□□□ -0.18
Mmp25Q3U435 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp25Q3U435 Gm18889-201ENSMUST00000174284 929 ntBASIC13.92□□□□□ -0.18
Mmp25Q3U435 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp25Q3U435 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp25Q3U435 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Mmp25Q3U435 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp25Q3U435 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp25Q3U435 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms