Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nhej1Q3KNJ2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nhej1Q3KNJ2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nhej1Q3KNJ2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Gm5682-201ENSMUST00000173402 505 ntBASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nhej1Q3KNJ2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms