Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.24□□□□□ -0.45
Trim63Q38HM4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim63Q38HM4 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Mtag2-201ENSMUST00000058665 714 ntBASIC12.24□□□□□ -0.45
Trim63Q38HM4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Gm12008-201ENSMUST00000117791 755 ntBASIC12.23□□□□□ -0.45
Trim63Q38HM4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim63Q38HM4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim63Q38HM4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Paupar-201ENSMUST00000194826 3482 ntBASIC12.23□□□□□ -0.45
Trim63Q38HM4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim63Q38HM4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Gm21956-201ENSMUST00000179946 522 ntBASIC12.22□□□□□ -0.45
Trim63Q38HM4 Gm36967-201ENSMUST00000193814 266 ntBASIC12.22□□□□□ -0.45
Trim63Q38HM4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim63Q38HM4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim63Q38HM4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.22□□□□□ -0.45
Trim63Q38HM4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.21□□□□□ -0.45
Trim63Q38HM4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms