Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Gm3756-201ENSMUST00000169182 1355 ntBASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Dancr-204ENSMUST00000132389 2347 ntBASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Gm13886-201ENSMUST00000117876 1183 ntBASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Gm6023-201ENSMUST00000118217 606 ntBASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 AC154222.2-201ENSMUST00000225848 607 ntBASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Morn2-202ENSMUST00000227729 656 ntBASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC7.71□□□□□ -1.18
Ush2AQ2QI47 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Gm37230-201ENSMUST00000194491 818 ntBASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Gm19166-201ENSMUST00000196041 1063 ntBASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Gm43094-201ENSMUST00000196549 921 ntBASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Gm11964-201ENSMUST00000120982 444 ntBASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Gm21470-201ENSMUST00000187680 696 ntBASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Gm38144-201ENSMUST00000192790 465 ntBASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Gm16342-201ENSMUST00000124025 1025 ntBASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC7.7□□□□□ -1.18
Ush2AQ2QI47 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm4691-201ENSMUST00000182339 1000 ntBASIC7.69□□□□□ -1.18
Ush2AQ2QI47 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm2451-201ENSMUST00000199447 999 ntBASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm10290-201ENSMUST00000200451 999 ntBASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Fam105a-203ENSMUST00000226170 3043 ntBASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms