Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Gm8749-201ENSMUST00000117737 331 ntBASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna5Q2MKA5 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.52■□□□□ 0.39
Chrna5Q2MKA5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna5Q2MKA5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna5Q2MKA5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna5Q2MKA5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna5Q2MKA5 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna5Q2MKA5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Olfr286-202ENSMUST00000205305 969 ntBASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Gm6916-202ENSMUST00000205523 195 ntBASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Gm5035-201ENSMUST00000215581 927 ntBASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Gm9899-201ENSMUST00000065519 555 ntBASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.51■□□□□ 0.39
Chrna5Q2MKA5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Prob1-201ENSMUST00000097619 3021 ntBASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Gm15678-201ENSMUST00000117573 960 ntBASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Gm15824-201ENSMUST00000119516 955 ntBASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Mir6420-201ENSMUST00000185032 102 ntBASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Gm43630-201ENSMUST00000201550 776 ntBASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna5Q2MKA5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Gm6007-201ENSMUST00000208170 823 ntBASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna5Q2MKA5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms