Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim72Q1XH17 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim72Q1XH17 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim72Q1XH17 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim72Q1XH17 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim72Q1XH17 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim72Q1XH17 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Trim72Q1XH17 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim72Q1XH17 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim72Q1XH17 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.8■□□□□ 0.12
Trim72Q1XH17 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim72Q1XH17 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim72Q1XH17 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Mir3113-201ENSMUST00000175478 76 ntBASIC15.79■□□□□ 0.12
Trim72Q1XH17 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim72Q1XH17 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Gm15467-201ENSMUST00000120582 445 ntBASIC15.78■□□□□ 0.12
Trim72Q1XH17 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.78■□□□□ 0.12
Trim72Q1XH17 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.78■□□□□ 0.12
Trim72Q1XH17 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.78■□□□□ 0.12
Trim72Q1XH17 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim72Q1XH17 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trim72Q1XH17 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trim72Q1XH17 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim72Q1XH17 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim72Q1XH17 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim72Q1XH17 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim72Q1XH17 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim72Q1XH17 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim72Q1XH17 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Trim72Q1XH17 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim72Q1XH17 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.77■□□□□ 0.12
Trim72Q1XH17 Gm44492-201ENSMUST00000197012 141 ntBASIC15.77■□□□□ 0.12
Trim72Q1XH17 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trim72Q1XH17 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim72Q1XH17 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.77■□□□□ 0.11
Trim72Q1XH17 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim72Q1XH17 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim72Q1XH17 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim72Q1XH17 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim72Q1XH17 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim72Q1XH17 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim72Q1XH17 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim72Q1XH17 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trim72Q1XH17 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim72Q1XH17 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim72Q1XH17 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms