Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Gm18622-201ENSMUST00000219361 595 ntBASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.33□□□□□ -0.11
Ptchd3Q0EEE2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ptchd3Q0EEE2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ptchd3Q0EEE2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ptchd3Q0EEE2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.33□□□□□ -0.11
Ptchd3Q0EEE2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ptchd3Q0EEE2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Gm14722-201ENSMUST00000118943 689 ntBASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptchd3Q0EEE2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptchd3Q0EEE2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ptchd3Q0EEE2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms