Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.42□□□□□ -0.1
Msx2Q03358 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.42□□□□□ -0.1
Msx2Q03358 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.42□□□□□ -0.1
Msx2Q03358 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Msx2Q03358 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.42□□□□□ -0.1
Msx2Q03358 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Msx2Q03358 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx2Q03358 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Msx2Q03358 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Msx2Q03358 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Msx2Q03358 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Msx2Q03358 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Msx2Q03358 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.41□□□□□ -0.1
Msx2Q03358 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Msx2Q03358 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Msx2Q03358 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.41□□□□□ -0.1
Msx2Q03358 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Gm7506-201ENSMUST00000207758 815 ntBASIC14.41□□□□□ -0.1
Msx2Q03358 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Msx2Q03358 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.41□□□□□ -0.1
Msx2Q03358 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Msx2Q03358 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx2Q03358 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Msx2Q03358 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Msx2Q03358 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Msx2Q03358 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Msx2Q03358 Gm8318-201ENSMUST00000182954 872 ntBASIC14.4□□□□□ -0.1
Msx2Q03358 Gm27867-201ENSMUST00000184778 125 ntBASIC14.4□□□□□ -0.1
Msx2Q03358 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.4□□□□□ -0.1
Msx2Q03358 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Msx2Q03358 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msx2Q03358 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Msx2Q03358 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.39□□□□□ -0.11
Msx2Q03358 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.39□□□□□ -0.11
Msx2Q03358 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx2Q03358 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx2Q03358 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Msx2Q03358 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx2Q03358 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msx2Q03358 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx2Q03358 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Msx2Q03358 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msx2Q03358 Gm8344-201ENSMUST00000119813 856 ntBASIC14.39□□□□□ -0.11
Msx2Q03358 Rprl3-201ENSMUST00000157400 290 ntBASIC14.39□□□□□ -0.11
Msx2Q03358 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.39□□□□□ -0.11
Msx2Q03358 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.39□□□□□ -0.11
Msx2Q03358 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.39□□□□□ -0.11
Msx2Q03358 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msx2Q03358 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms