Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh6P97326 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh6P97326 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh6P97326 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh6P97326 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh6P97326 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.02■□□□□ -0
Cdh6P97326 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.02■□□□□ -0
Cdh6P97326 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.02■□□□□ -0
Cdh6P97326 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.02■□□□□ -0
Cdh6P97326 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh6P97326 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh6P97326 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh6P97326 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cdh6P97326 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh6P97326 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh6P97326 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.02□□□□□ -0.01
Cdh6P97326 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh6P97326 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh6P97326 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh6P97326 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh6P97326 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh6P97326 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh6P97326 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.01□□□□□ -0.01
Cdh6P97326 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.01□□□□□ -0.01
Cdh6P97326 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.01□□□□□ -0.01
Cdh6P97326 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Cdh6P97326 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cdh6P97326 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Rpph1-201ENSMUST00000175096 319 ntBASIC15.01□□□□□ -0.01
Cdh6P97326 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.01□□□□□ -0.01
Cdh6P97326 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.01□□□□□ -0.01
Cdh6P97326 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cdh6P97326 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Cdh6P97326 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.01□□□□□ -0.01
Cdh6P97326 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cdh6P97326 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cdh6P97326 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.01□□□□□ -0.01
Cdh6P97326 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh6P97326 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh6P97326 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh6P97326 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh6P97326 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdh6P97326 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh6P97326 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Cdh6P97326 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15□□□□□ -0.01
Cdh6P97326 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15□□□□□ -0.01
Cdh6P97326 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh6P97326 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh6P97326 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cdh6P97326 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh6P97326 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cdh6P97326 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh6P97326 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh6P97326 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdh6P97326 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdh6P97326 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdh6P97326 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdh6P97326 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.99□□□□□ -0.01
Cdh6P97326 Gm13464-201ENSMUST00000119418 935 ntBASIC14.99□□□□□ -0.01
Cdh6P97326 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.99□□□□□ -0.01
Cdh6P97326 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cdh6P97326 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cdh6P97326 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh6P97326 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms