Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.11■□□□□ 0.17
Trim43cP86449 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim43cP86449 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43cP86449 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim43cP86449 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim43cP86449 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43cP86449 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43cP86449 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43cP86449 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Trim43cP86449 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Trim43cP86449 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim43cP86449 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.1■□□□□ 0.17
Trim43cP86449 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Trim43cP86449 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.1■□□□□ 0.17
Trim43cP86449 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.1■□□□□ 0.17
Trim43cP86449 Gm5264-201ENSMUST00000190584 848 ntBASIC16.1■□□□□ 0.17
Trim43cP86449 Gm2451-201ENSMUST00000199447 999 ntBASIC16.1■□□□□ 0.17
Trim43cP86449 Gm10290-201ENSMUST00000200451 999 ntBASIC16.1■□□□□ 0.17
Trim43cP86449 Olfr286-202ENSMUST00000205305 969 ntBASIC16.1■□□□□ 0.17
Trim43cP86449 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trim43cP86449 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.1■□□□□ 0.17
Trim43cP86449 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.1■□□□□ 0.17
Trim43cP86449 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43cP86449 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trim43cP86449 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trim43cP86449 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim43cP86449 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim43cP86449 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.09■□□□□ 0.17
Trim43cP86449 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.09■□□□□ 0.17
Trim43cP86449 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Trim43cP86449 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43cP86449 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim43cP86449 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim43cP86449 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trim43cP86449 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim43cP86449 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim43cP86449 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.08■□□□□ 0.17
Trim43cP86449 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim43cP86449 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim43cP86449 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trim43cP86449 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.08■□□□□ 0.16
Trim43cP86449 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.08■□□□□ 0.16
Trim43cP86449 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.08■□□□□ 0.16
Trim43cP86449 Gm15483-201ENSMUST00000120338 456 ntBASIC16.08■□□□□ 0.16
Trim43cP86449 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim43cP86449 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trim43cP86449 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.08■□□□□ 0.16
Trim43cP86449 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms