Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Tpm1P58771 Gm15165-201ENSMUST00000118140 502 ntBASIC16.55■□□□□ 0.24
Tpm1P58771 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.55■□□□□ 0.24
Tpm1P58771 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.55■□□□□ 0.24
Tpm1P58771 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.55■□□□□ 0.24
Tpm1P58771 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tpm1P58771 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.55■□□□□ 0.24
Tpm1P58771 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tpm1P58771 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Tpm1P58771 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tpm1P58771 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tpm1P58771 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tpm1P58771 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tpm1P58771 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tpm1P58771 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tpm1P58771 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tpm1P58771 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.55■□□□□ 0.24
Tpm1P58771 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Tpm1P58771 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tpm1P58771 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Tpm1P58771 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Tpm1P58771 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Tpm1P58771 Celf4-206ENSMUST00000224553 1729 ntBASIC16.54■□□□□ 0.24
Tpm1P58771 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.54■□□□□ 0.24
Tpm1P58771 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.54■□□□□ 0.24
Tpm1P58771 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.54■□□□□ 0.24
Tpm1P58771 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Tpm1P58771 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Tpm1P58771 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpm1P58771 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tpm1P58771 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Tpm1P58771 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.53■□□□□ 0.24
Tpm1P58771 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Gm10231-201ENSMUST00000181584 441 ntBASIC16.53■□□□□ 0.24
Tpm1P58771 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Gm10175-202ENSMUST00000208752 441 ntBASIC16.53■□□□□ 0.24
Tpm1P58771 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tpm1P58771 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.53■□□□□ 0.24
Tpm1P58771 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Tpm1P58771 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Tpm1P58771 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.53■□□□□ 0.24
Tpm1P58771 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpm1P58771 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Tpm1P58771 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.53■□□□□ 0.24
Tpm1P58771 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.24
Tpm1P58771 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.52■□□□□ 0.24
Tpm1P58771 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.52■□□□□ 0.24
Tpm1P58771 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 Gm4459-201ENSMUST00000118750 468 ntBASIC16.52■□□□□ 0.24
Tpm1P58771 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.52■□□□□ 0.24
Tpm1P58771 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Tpm1P58771 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpm1P58771 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tpm1P58771 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
Tpm1P58771 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tpm1P58771 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Tpm1P58771 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tpm1P58771 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tpm1P58771 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tpm1P58771 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms