Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.07■□□□□ 0
Sox1P53783 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox1P53783 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.07■□□□□ 0
Sox1P53783 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sox1P53783 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox1P53783 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox1P53783 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox1P53783 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sox1P53783 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox1P53783 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox1P53783 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.07■□□□□ 0
Sox1P53783 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox1P53783 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sox1P53783 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.06■□□□□ 0
Sox1P53783 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.06■□□□□ 0
Sox1P53783 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Gm43822-201ENSMUST00000200285 476 ntBASIC15.06■□□□□ 0
Sox1P53783 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.06■□□□□ 0
Sox1P53783 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.06■□□□□ 0
Sox1P53783 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.06■□□□□ 0
Sox1P53783 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sox1P53783 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sox1P53783 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.06■□□□□ 0
Sox1P53783 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox1P53783 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox1P53783 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Sox1P53783 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Sox1P53783 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sox1P53783 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox1P53783 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sox1P53783 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sox1P53783 Gm15808-201ENSMUST00000119046 604 ntBASIC15.05■□□□□ -0
Sox1P53783 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.05■□□□□ -0
Sox1P53783 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.05■□□□□ -0
Sox1P53783 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sox1P53783 Gm6013-201ENSMUST00000212264 699 ntBASIC15.05■□□□□ -0
Sox1P53783 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.05■□□□□ -0
Sox1P53783 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.05■□□□□ -0
Sox1P53783 Gm6091-201ENSMUST00000098307 165 ntBASIC15.05■□□□□ -0
Sox1P53783 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sox1P53783 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox1P53783 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox1P53783 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.05■□□□□ -0
Sox1P53783 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.05■□□□□ -0
Sox1P53783 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox1P53783 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox1P53783 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox1P53783 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sox1P53783 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Sox1P53783 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox1P53783 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox1P53783 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox1P53783 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.04■□□□□ -0
Sox1P53783 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Gm5479-201ENSMUST00000160578 435 ntBASIC15.04■□□□□ -0
Sox1P53783 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.04■□□□□ -0
Sox1P53783 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.04■□□□□ -0
Sox1P53783 Gm8652-201ENSMUST00000181363 964 ntBASIC15.04■□□□□ -0
Sox1P53783 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.04■□□□□ -0
Sox1P53783 Gm45453-201ENSMUST00000211758 853 ntBASIC15.04■□□□□ -0
Sox1P53783 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Sox1P53783 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms