Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.62□□□□□ -0.39
Hmga2P52927 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.62□□□□□ -0.39
Hmga2P52927 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hmga2P52927 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.62□□□□□ -0.39
Hmga2P52927 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hmga2P52927 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.61□□□□□ -0.39
Hmga2P52927 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.61□□□□□ -0.39
Hmga2P52927 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hmga2P52927 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Gm10231-201ENSMUST00000181584 441 ntBASIC12.61□□□□□ -0.39
Hmga2P52927 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.61□□□□□ -0.39
Hmga2P52927 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Gm10175-202ENSMUST00000208752 441 ntBASIC12.61□□□□□ -0.39
Hmga2P52927 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.61□□□□□ -0.39
Hmga2P52927 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hmga2P52927 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hmga2P52927 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hmga2P52927 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Hmga2P52927 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.61□□□□□ -0.39
Hmga2P52927 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmga2P52927 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Hmga2P52927 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hmga2P52927 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hmga2P52927 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Hmga2P52927 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.6□□□□□ -0.39
Hmga2P52927 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.6□□□□□ -0.39
Hmga2P52927 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.6□□□□□ -0.39
Hmga2P52927 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.6□□□□□ -0.39
Hmga2P52927 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hmga2P52927 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.6□□□□□ -0.39
Hmga2P52927 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
Hmga2P52927 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Hmga2P52927 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga2P52927 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms