Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.54■□□□□ 0.08
Rfx2P48379 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.54■□□□□ 0.08
Rfx2P48379 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.54■□□□□ 0.08
Rfx2P48379 Gm44335-201ENSMUST00000196879 141 ntBASIC15.54■□□□□ 0.08
Rfx2P48379 Gm44297-201ENSMUST00000198304 141 ntBASIC15.54■□□□□ 0.08
Rfx2P48379 Gm44346-201ENSMUST00000198851 141 ntBASIC15.54■□□□□ 0.08
Rfx2P48379 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.54■□□□□ 0.08
Rfx2P48379 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx2P48379 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx2P48379 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.54■□□□□ 0.08
Rfx2P48379 Gm10154-201ENSMUST00000084445 354 ntBASIC15.54■□□□□ 0.08
Rfx2P48379 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rfx2P48379 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx2P48379 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rfx2P48379 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx2P48379 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx2P48379 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.54■□□□□ 0.08
Rfx2P48379 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx2P48379 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx2P48379 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx2P48379 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.53■□□□□ 0.08
Rfx2P48379 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.53■□□□□ 0.08
Rfx2P48379 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.53■□□□□ 0.08
Rfx2P48379 Gm16198-201ENSMUST00000118766 670 ntBASIC15.53■□□□□ 0.08
Rfx2P48379 Gm11745-201ENSMUST00000121669 448 ntBASIC15.53■□□□□ 0.08
Rfx2P48379 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.53■□□□□ 0.08
Rfx2P48379 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.53■□□□□ 0.08
Rfx2P48379 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.53■□□□□ 0.08
Rfx2P48379 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rfx2P48379 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.53■□□□□ 0.08
Rfx2P48379 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rfx2P48379 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rfx2P48379 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Rfx2P48379 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rfx2P48379 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.53■□□□□ 0.08
Rfx2P48379 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx2P48379 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Rfx2P48379 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx2P48379 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx2P48379 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx2P48379 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx2P48379 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.52■□□□□ 0.08
Rfx2P48379 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx2P48379 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx2P48379 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx2P48379 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx2P48379 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx2P48379 Auts2-212ENSMUST00000178555 309 ntBASIC15.52■□□□□ 0.08
Rfx2P48379 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.52■□□□□ 0.08
Rfx2P48379 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.52■□□□□ 0.08
Rfx2P48379 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.52■□□□□ 0.08
Rfx2P48379 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rfx2P48379 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx2P48379 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rfx2P48379 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rfx2P48379 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.52■□□□□ 0.07
Rfx2P48379 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx2P48379 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx2P48379 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx2P48379 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx2P48379 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx2P48379 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rfx2P48379 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.51■□□□□ 0.07
Rfx2P48379 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx2P48379 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.51■□□□□ 0.07
Rfx2P48379 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Rfx2P48379 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx2P48379 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx2P48379 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.51■□□□□ 0.07
Rfx2P48379 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.51■□□□□ 0.07
Rfx2P48379 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.51■□□□□ 0.07
Rfx2P48379 Gm18889-201ENSMUST00000174284 929 ntBASIC15.51■□□□□ 0.07
Rfx2P48379 Mir6990-201ENSMUST00000183724 91 ntBASIC15.51■□□□□ 0.07
Rfx2P48379 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.51■□□□□ 0.07
Rfx2P48379 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rfx2P48379 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx2P48379 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Rfx2P48379 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx2P48379 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.51■□□□□ 0.07
Rfx2P48379 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx2P48379 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfx2P48379 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfx2P48379 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfx2P48379 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rfx2P48379 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms