Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.21□□□□□ -0.13
Sox18P43680 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.21□□□□□ -0.13
Sox18P43680 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Gm45878-201ENSMUST00000211839 241 ntBASIC14.21□□□□□ -0.13
Sox18P43680 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.21□□□□□ -0.13
Sox18P43680 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sox18P43680 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox18P43680 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Sox18P43680 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Prob1-201ENSMUST00000097619 3021 ntBASIC14.2□□□□□ -0.14
Sox18P43680 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sox18P43680 App-207ENSMUST00000227737 2827 ntBASIC14.2□□□□□ -0.14
Sox18P43680 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.2□□□□□ -0.14
Sox18P43680 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox18P43680 Gm12849-201ENSMUST00000120013 739 ntBASIC14.2□□□□□ -0.14
Sox18P43680 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Sox18P43680 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 AY702102-202ENSMUST00000194651 1173 ntBASIC14.2□□□□□ -0.14
Sox18P43680 Gm45668-201ENSMUST00000211271 493 ntBASIC14.2□□□□□ -0.14
Sox18P43680 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Sox18P43680 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Sox18P43680 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sox18P43680 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.2□□□□□ -0.14
Sox18P43680 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox18P43680 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.2□□□□□ -0.14
Sox18P43680 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox18P43680 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox18P43680 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox18P43680 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Gm27920-201ENSMUST00000183953 96 ntBASIC14.19□□□□□ -0.14
Sox18P43680 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Sox18P43680 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sox18P43680 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sox18P43680 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox18P43680 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox18P43680 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox18P43680 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox18P43680 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox18P43680 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sox18P43680 Dancr-204ENSMUST00000132389 2347 ntBASIC14.18□□□□□ -0.14
Sox18P43680 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox18P43680 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.18□□□□□ -0.14
Sox18P43680 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.18□□□□□ -0.14
Sox18P43680 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Sox18P43680 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.18□□□□□ -0.14
Sox18P43680 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Gm17150-201ENSMUST00000165577 381 ntBASIC14.18□□□□□ -0.14
Sox18P43680 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.18□□□□□ -0.14
Sox18P43680 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Gm19324-201ENSMUST00000213229 1169 ntBASIC14.18□□□□□ -0.14
Sox18P43680 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox18P43680 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.18□□□□□ -0.14
Sox18P43680 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms