Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VhlP40338 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
VhlP40338 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
VhlP40338 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.17□□□□□ -0.46
VhlP40338 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
VhlP40338 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
VhlP40338 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.17□□□□□ -0.46
VhlP40338 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
VhlP40338 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.17□□□□□ -0.46
VhlP40338 Olfr129-201ENSMUST00000122318 993 ntBASIC12.17□□□□□ -0.46
VhlP40338 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Gm10499-201ENSMUST00000174094 934 ntBASIC12.17□□□□□ -0.46
VhlP40338 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.17□□□□□ -0.46
VhlP40338 Gm7506-201ENSMUST00000207758 815 ntBASIC12.17□□□□□ -0.46
VhlP40338 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
VhlP40338 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VhlP40338 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
VhlP40338 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
VhlP40338 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.16□□□□□ -0.46
VhlP40338 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.16□□□□□ -0.46
VhlP40338 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.16□□□□□ -0.46
VhlP40338 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
VhlP40338 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.16□□□□□ -0.46
VhlP40338 Gm27742-201ENSMUST00000184667 60 ntBASIC12.16□□□□□ -0.46
VhlP40338 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.16□□□□□ -0.46
VhlP40338 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
VhlP40338 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
VhlP40338 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
VhlP40338 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
VhlP40338 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
VhlP40338 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VhlP40338 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VhlP40338 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VhlP40338 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VhlP40338 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VhlP40338 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.15□□□□□ -0.46
VhlP40338 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VhlP40338 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
VhlP40338 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
VhlP40338 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VhlP40338 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VhlP40338 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
VhlP40338 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
VhlP40338 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms