Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Cxcl12P40224 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cxcl12P40224 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.17■□□□□ 0.02
Cxcl12P40224 Gm12390-201ENSMUST00000117897 397 ntBASIC15.17■□□□□ 0.02
Cxcl12P40224 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.17■□□□□ 0.02
Cxcl12P40224 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Gm33320-201ENSMUST00000192232 530 ntBASIC15.17■□□□□ 0.02
Cxcl12P40224 Gm6916-202ENSMUST00000205523 195 ntBASIC15.17■□□□□ 0.02
Cxcl12P40224 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.17■□□□□ 0.02
Cxcl12P40224 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cxcl12P40224 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.17■□□□□ 0.02
Cxcl12P40224 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Gm15678-201ENSMUST00000117573 960 ntBASIC15.16■□□□□ 0.02
Cxcl12P40224 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.16■□□□□ 0.02
Cxcl12P40224 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.16■□□□□ 0.02
Cxcl12P40224 Gm27839-201ENSMUST00000184242 106 ntBASIC15.16■□□□□ 0.02
Cxcl12P40224 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Cxcl12P40224 Gm9182-201ENSMUST00000217829 639 ntBASIC15.16■□□□□ 0.02
Cxcl12P40224 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.16■□□□□ 0.02
Cxcl12P40224 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.16■□□□□ 0.02
Cxcl12P40224 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cxcl12P40224 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cxcl12P40224 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Cxcl12P40224 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.15■□□□□ 0.02
Cxcl12P40224 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Cxcl12P40224 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.15■□□□□ 0.02
Cxcl12P40224 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.15■□□□□ 0.02
Cxcl12P40224 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.15■□□□□ 0.02
Cxcl12P40224 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cxcl12P40224 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.15■□□□□ 0.02
Cxcl12P40224 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.02
Cxcl12P40224 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.14■□□□□ 0.01
Cxcl12P40224 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.14■□□□□ 0.01
Cxcl12P40224 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cxcl12P40224 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Gm13392-201ENSMUST00000117708 150 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms