Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13□□□□□ -0.33
Upk2P38575 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Upk2P38575 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Upk2P38575 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Upk2P38575 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Gm8749-201ENSMUST00000117737 331 ntBASIC12.99□□□□□ -0.33
Upk2P38575 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.99□□□□□ -0.33
Upk2P38575 Gm1401-201ENSMUST00000122048 772 ntBASIC12.99□□□□□ -0.33
Upk2P38575 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Gm16026-204ENSMUST00000162652 683 ntBASIC12.99□□□□□ -0.33
Upk2P38575 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.99□□□□□ -0.33
Upk2P38575 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.99□□□□□ -0.33
Upk2P38575 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.99□□□□□ -0.33
Upk2P38575 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.99□□□□□ -0.33
Upk2P38575 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.99□□□□□ -0.33
Upk2P38575 Gm10154-201ENSMUST00000084445 354 ntBASIC12.99□□□□□ -0.33
Upk2P38575 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Upk2P38575 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Upk2P38575 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk2P38575 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Upk2P38575 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Upk2P38575 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.98□□□□□ -0.33
Upk2P38575 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.98□□□□□ -0.33
Upk2P38575 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.98□□□□□ -0.33
Upk2P38575 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.98□□□□□ -0.33
Upk2P38575 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Upk2P38575 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.98□□□□□ -0.33
Upk2P38575 Gm16198-201ENSMUST00000118766 670 ntBASIC12.98□□□□□ -0.33
Upk2P38575 Gm23547-201ENSMUST00000158210 271 ntBASIC12.98□□□□□ -0.33
Upk2P38575 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Gm5177-201ENSMUST00000183092 997 ntBASIC12.98□□□□□ -0.33
Upk2P38575 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.98□□□□□ -0.33
Upk2P38575 Thap2-203ENSMUST00000218989 527 ntBASIC12.98□□□□□ -0.33
Upk2P38575 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Upk2P38575 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Upk2P38575 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Upk2P38575 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk2P38575 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms